| Date | Transaction | |||
| 6/27/06 | Activated RHP Pete Walker from the 15-day disabled list and outrighted RHP Josh Towers to Triple-A Syracuse. | |||
| 6/22/06 | Optioned RHP Francisco Rosario to Triple-A Syracuse and activated RHP A.J. Burnett from the 60-day disabled list. | |||
| 6/19/06 | Purchased the contract of RHP Josh Towers from Triple-A Syracuse. | |||
| 6/18/06 | Optioned Vinnie Chulk to Triple-A Syracuse. | |||
| 6/12/06 | Activated INF John McDonald from the 15-day disabled list and recalled INF Russ Adams from Triple-A Syracuse; Released Edgardo Alfonzo; Sent Luis Figueroa outright to Syracuse. | |||
| 6/10/06 | Placed LHP Gustavo Chacin and RHP Pete Walker on the 15-day disabled list; Recalled RHP Vinnie Chulk and LHP Brian Tallet from Triple-A Syracuse. | |||